Atlases

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Single-nuclei RNA-seq of childhood PFA Ependymoma recurrence

snRNA-seq of 7 matched primary and first recurrence childhood EPN PFA samples
Single-nuclei RNA-seq of childhood PFA Ependymoma recurrence

Characterizing the immunobiology of high risk pediatric ependymoma

Multi-Omic approach identifies hypoxic tumor-associated myeloid cells that drive immunobiology of high risk pediatric ependymoma
Characterizing the immunobiology of high risk pediatric ependymoma

Single-cell RNA-seq of pediatric high-grade glioma

scRNA-seq of 19 pediatric high-grade glioma (PHGG) patient samples
Single-cell RNA-seq of pediatric high-grade glioma

Publications

Single-Cell RNA Sequencing of Childhood Ependymoma Reveals Neoplastic Cell Subpopulations That Impact Molecular Classification and Etiology

Summary Ependymoma (EPN) is a brain tumor commonly presenting in childhood that remains fatal in most children. Intra-tumoral cellular …

Neoplastic and immune single cell transcriptomics define subgroup-specific intra-tumoral heterogeneity of childhood medulloblastoma

BACKGROUND: Medulloblastoma (MB) is a heterogeneous disease in which neoplastic cells and associated immune cells contribute to disease …

Spatial transcriptomic analysis delineates epithelial and mesenchymal subpopulations and transition stages in childhood ependymoma

BACKGROUND: The diverse cellular constituents of childhood brain tumor ependymoma, recently revealed by single cell RNA-sequencing, may …

Significant increase of high-risk chromosome 1q gain and 6q loss at recurrence in posterior fossa group A ependymoma: a multicenter study

BACKGROUND: Ependymoma (EPN) posterior fossa group A (PFA) has the highest rate of recurrence and the worst prognosis of all EPN …

Multi-Omic approach identifies hypoxic tumor-associated myeloid cells that drive immunobiology of high risk pediatric ependymoma

SummaryEpendymoma (EPN) is a devastating childhood brain tumor. Single-cell analyses have illustrated the cellular heterogeneity of EPN …

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